Frequently Asked Questions about PepSeq

Q. What is PepSeq?
A. PepSeq is a Peptide Sequencing simulation program, created to assist biochemistry students in understanding the basic processes involved in peptide sequencing.

Q. How would PepSeq help my students learn about peptide sequencing?
A. PepSeq demonstrates in practical terms the steps involved in determining the amino acid sequence of a protein. These steps include:

  1. Determination of amino acid composition of the peptide
  2. Identification of N-terminal and C-terminal residues
  3. Cleavage of the peptide into smaller fragments
  4. Repeating steps 1-2 for each smaller fragment

Q. How much does it cost?
A. PepSeq is provided as a service rather than sold as a product. The fee is charged for each student. This covers:

  • Automatic generation of student peptides, with the lecturer choosing degree of difficulty
  • Download link to student program
  • Access to online help pages to assist lecturers & students to use PepSeq to it's maximum potential
  • Interpretation and collation of student results at the completion of their simulated experiments
  • Online help from lecturers

Q. How do I get a free trial of PepSeq?
A. Simply submit your details in the information form.

Q. What computers will it run on?
A. PepSeq is an online application designed to run on any PC (Windows 95, 98, ME, 2000, XP) with Internet Internet Explorer 4 or higher.


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